Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lptDLPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. (805 aa)    
Predicted Functional Partners:
BF49_0964
FIG000906 Predicted Permease.
 
 
 0.971
BF49_0963
FIG000988 Predicted permease.
 
 
 0.969
BF49_0120
OstAlike protein.
 
 0.953
BF49_0966
Survival protein SurA precursor Peptidylprolyl cistrans isomerase SurA EC 5218.
 
  
 0.916
rsmA
SSU rRNA adenine1518N6adenine1519N6 dimethyltransferase EC 211182; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
  
 0.870
BF49_6574
Possible outer membrane protein possible porin precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
  
 0.845
BF49_6501
Possible outer membrane protein possible porin precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
  
 0.843
BF49_6738
Peptidylprolyl cistrans isomerase PpiD EC 5218.
 
  
 0.808
BF49_0230
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
   
 0.796
BF49_0119
ABC transporter ATPbinding protein.
 
 
 0.791
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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