Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0985Fatty acid desaturase family protein. (341 aa)    
Predicted Functional Partners:
BF49_0986
Transcriptional regulator TetR family.
       0.809
BF49_1280
Similar to flavohemoprotein.
  
 
 0.750
BF49_2412
Flavodoxin reductases ferredoxinNADPH reductases family 1 Vanillate Odemethylase oxidoreductase EC 11413.
  
 
 0.711
BF49_1748
FIG00440295 hypothetical protein.
  
     0.702
BF49_3310
FIG01004869 hypothetical protein.
  
     0.664
BF49_0987
Hypothetical protein.
       0.572
BF49_4154
FIG00440809 hypothetical protein.
  
    0.566
BF49_0984
Malonyl CoAacyl carrier protein transacylase EC 23139.
  
  
 0.553
BF49_2277
Glycosyl transferase group 2 family protein.
  
  
 0.537
BF49_0393
FIG00450577 hypothetical protein.
   
    0.509
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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