STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0998Alanine racemase EC 5111; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (426 aa)    
Predicted Functional Partners:
BF49_1500
Alanine dehydrogenase EC 1411; Belongs to the AlaDH/PNT family.
  
 
 0.973
BF49_5057
DalanineDalanine ligase EC 6324; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
 
 0.965
BF49_2984
DalanineDalanine ligase EC 6324; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
 
 0.955
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.941
BF49_3121
Dalanine aminotransferase EC 26121.
    
 0.929
BF49_5049
UDPNacetylmuramoylalanylDglutamyl26 diaminopimelateDalanylDalanine ligase EC 63210.
  
 0.927
BF49_0473
Serineglyoxylate aminotransferase EC 26145.
    
 0.820
BF49_5632
Serineglyoxylate aminotransferase EC 26145.
    
 0.820
nadD
Nicotinatenucleotide adenylyltransferase EC 27718; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
  
 0.807
BF49_6424
Nitrilase EC 3557.
    
 0.807
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.