Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_0998Alanine racemase EC 5111; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (426 aa)    
Predicted Functional Partners:
BF49_1500
Alanine dehydrogenase EC 1411; Belongs to the AlaDH/PNT family.
  
 
 0.975
BF49_5057
DalanineDalanine ligase EC 6324; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
 
 0.966
BF49_2984
DalanineDalanine ligase EC 6324; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
 
 0.957
BF49_3121
Dalanine aminotransferase EC 26121.
    
 0.933
BF49_5049
UDPNacetylmuramoylalanylDglutamyl26 diaminopimelateDalanylDalanine ligase EC 63210.
  
 0.932
BF49_2793
Proline dehydrogenase EC 15998 Proline oxidase Delta1pyrroline5carboxylate dehydrogenase EC 15112; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.888
purQ
Phosphoribosylformylglycinamidine synthase glutamine amidotransferase subunit EC 6353; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with [...]
    
 0.851
BF49_0889
Glutamine synthetase type II eukaryotic EC 6312.
     
 0.835
BF49_6608
Glutamine synthetase type I EC 6312.
     
 0.835
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
    
  0.822
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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