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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1006Periplasmic sugarbinding domain protein. (384 aa)    
Predicted Functional Partners:
BF49_1005
Diguanylate cyclasephosphodiesterase GGDEF EAL domains with PASPAC sensors.
       0.796
BF49_2142
Twocomponent hybrid sensor and regulator.
   
 
 0.754
BF49_1446
Sensory box histidine kinaseresponse regulator.
 
 
 0.744
BF49_1483
Putative sugar ABC transport system permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family.
 
 0.734
BF49_3244
Chemotaxis protein methyltransferase CheR EC 21180.
   
 
 0.730
BF49_6720
ABC transporter substratebinding protein.
 
 
 0.715
BF49_0769
Twocomponent hybrid sensor and regulator.
   
 
 0.698
BF49_1323
Ribosexylosearabinosegalactoside ABCtype transport systems permease component 1.
 
 0.684
BF49_2876
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
   
 
 0.683
BF49_0183
Twocomponent hybrid sensor and regulator.
   
 
 0.669
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.