Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1016Mlr7403 protein. (191 aa)    
Predicted Functional Partners:
BF49_1015
VgrG protein.
  
    0.824
BF49_6753
Cell division protein DivIC FtsB stabilizes FtsL against RasP cleavage.
  
   
 0.763
BF49_6439
ATPGTPbinding site motif A.
  
     0.732
der
GTPbinding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.718
BF49_6559
Conserved hypothetical protein gene in Ubiquinolcytochrome C chaperone locus.
  
    0.701
BF49_7037
Hypothetical protein.
  
     0.676
BF49_3266
FIG00450348 hypothetical protein.
  
     0.662
BF49_0218
DNA polymerase III delta subunit EC 2777.
  
     0.656
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.652
BF49_6557
Outer membrane lipoprotein OmlA.
  
    0.650
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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