Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_1041Betalactamase class C and other penicillin binding proteins. (394 aa)    
Predicted Functional Partners:
BF49_1039
RNA polymerase ECFtype sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.598
BF49_1042
Acetyltransferase EC 231.
       0.572
BF49_1043
FIG00445454 hypothetical protein.
       0.572
BF49_1038
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.538
BF49_1040
Bsr4027 hypothetical protein.
       0.537
BF49_1037
Conserved protein.
       0.469
BF49_3144
Betahexosaminidase EC 32152.
 
 
 0.463
BF49_3945
Betalactamase class C and other penicillin binding proteins.
  
     0.454
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase EC 242; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
   
 
 0.446
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.414
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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