STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1043FIG00445454 hypothetical protein. (115 aa)    
Predicted Functional Partners:
BF49_1042
Acetyltransferase EC 231.
       0.785
BF49_1041
Betalactamase class C and other penicillin binding proteins.
       0.572
BF49_1712
FIG00440536 hypothetical protein.
  
     0.437
BF49_3542
FIG01007894 hypothetical protein.
  
     0.434
BF49_1038
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.401
BF49_1039
RNA polymerase ECFtype sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.401
BF49_1040
Bsr4027 hypothetical protein.
       0.401
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.