Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1051Hypothetical protein. (193 aa)    
Predicted Functional Partners:
BF49_1052
Transcriptional regulator TetR family.
 
     0.703
BF49_4273
Conserved hypothetical protein hypothetical UPF0337 protein; Belongs to the UPF0337 (CsbD) family.
  
    0.521
BF49_4402
Bll7128 unknown protein.
 
     0.517
BF49_1050
COG0553 Superfamily II DNARNA helicases SNF2 family.
   
   0.516
BF49_1873
InterPro IPR001395 COGs COG0656.
  
 0.493
BF49_2120
Oxidoreductase aldoketo reductase family.
  
 0.493
BF49_6399
Methylglyoxal reductase acetol producing EC 111 25diketoDgluconic acid reductase B EC 111274.
  
 0.493
BF49_2073
Acetylspermidine deacetylase EC 35148 Deacetylases including yeast histone deacetylase and acetoin utilization protein.
   
  0.484
BF49_2690
Acetylpolyamine aminohydrolase.
   
  0.484
BF49_7226
FIG00440594 hypothetical protein.
  
 
   0.484
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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