Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BF49_0269 | BF49_1056 | Transcriptional regulator ArsR family. | Transcriptional regulator ArsR family. | 0.421 |
BF49_1056 | BF49_0269 | Transcriptional regulator ArsR family. | Transcriptional regulator ArsR family. | 0.421 |
BF49_1056 | BF49_1057 | Transcriptional regulator ArsR family. | Aha1 domain protein. | 0.930 |
BF49_1056 | BF49_1058 | Transcriptional regulator ArsR family. | Uncharacterized protein ygiV. | 0.545 |
BF49_1056 | BF49_2869 | Transcriptional regulator ArsR family. | Transcriptional regulator ArsR family. | 0.754 |
BF49_1056 | BF49_2870 | Transcriptional regulator ArsR family. | Miscellaneous unknown. | 0.431 |
BF49_1056 | BF49_6338 | Transcriptional regulator ArsR family. | Probable glutathione Stransferaserelated transmembrane protein EC 25118. | 0.787 |
BF49_1056 | BF49_6452 | Transcriptional regulator ArsR family. | Arsenical pumpdriving ATPase EC 36316; Anion-transporting ATPase; Belongs to the arsA ATPase family. | 0.451 |
BF49_1057 | BF49_1056 | Aha1 domain protein. | Transcriptional regulator ArsR family. | 0.930 |
BF49_1057 | BF49_1058 | Aha1 domain protein. | Uncharacterized protein ygiV. | 0.536 |
BF49_1058 | BF49_1056 | Uncharacterized protein ygiV. | Transcriptional regulator ArsR family. | 0.545 |
BF49_1058 | BF49_1057 | Uncharacterized protein ygiV. | Aha1 domain protein. | 0.536 |
BF49_2869 | BF49_1056 | Transcriptional regulator ArsR family. | Transcriptional regulator ArsR family. | 0.754 |
BF49_2869 | BF49_2870 | Transcriptional regulator ArsR family. | Miscellaneous unknown. | 0.995 |
BF49_2869 | BF49_6338 | Transcriptional regulator ArsR family. | Probable glutathione Stransferaserelated transmembrane protein EC 25118. | 0.758 |
BF49_2870 | BF49_1056 | Miscellaneous unknown. | Transcriptional regulator ArsR family. | 0.431 |
BF49_2870 | BF49_2869 | Miscellaneous unknown. | Transcriptional regulator ArsR family. | 0.995 |
BF49_2870 | BF49_6338 | Miscellaneous unknown. | Probable glutathione Stransferaserelated transmembrane protein EC 25118. | 0.527 |
BF49_6338 | BF49_1056 | Probable glutathione Stransferaserelated transmembrane protein EC 25118. | Transcriptional regulator ArsR family. | 0.787 |
BF49_6338 | BF49_2869 | Probable glutathione Stransferaserelated transmembrane protein EC 25118. | Transcriptional regulator ArsR family. | 0.758 |
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