STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1061AcetoacetylCoA reductase EC 11136. (244 aa)    
Predicted Functional Partners:
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.729
BF49_6971
Hypothetical protein.
  
 0.701
BF49_0894
Shortchain dehydrogenasereductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.676
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 0.667
BF49_1062
3oxoacylacylcarrier protein reductase EC 111100.
 
    
0.633
BF49_1063
Ketosteroid isomeraserelated protein.
 
  
  0.581
BF49_1280
Similar to flavohemoprotein.
 
 0.558
BF49_0432
Sulfatase family protein EC 313.
   
 
 0.535
BF49_1060
FIG00794925 hypothetical protein; Belongs to the LysR transcriptional regulatory family.
 
     0.511
gcvP
Glycine dehydrogenase decarboxylating glycine cleavage system P protein EC 1442; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.499
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.