STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1077Putative oxidoreductase YncB. (340 aa)    
Predicted Functional Partners:
guaB
Inosine5monophosphate dehydrogenase EC 111205 CBS domain; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.612
BF49_6971
Hypothetical protein.
  
 
 0.528
BF49_0517
Trehalose6phosphate phosphatase EC 31312; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.521
BF49_5898
Putative Zndependent oxidoreductase PA5234.
 
  
 0.487
BF49_1873
InterPro IPR001395 COGs COG0656.
   
 
 0.474
BF49_2120
Oxidoreductase aldoketo reductase family.
   
 
 0.474
BF49_6399
Methylglyoxal reductase acetol producing EC 111 25diketoDgluconic acid reductase B EC 111274.
   
 
 0.474
BF49_1076
Hypothetical protein.
       0.442
BF49_0770
ThiJPfpI family protein.
 
    0.440
BF49_6177
Bll5454 hypothetical protein.
 
    0.422
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.