STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1090Type III PLP lowspecificity Dthreonine aldolase. (359 aa)    
Predicted Functional Partners:
BF49_1089
ABC transporter ATPbinding protein.
       0.632
BF49_1088
Bll3966 protein; Belongs to the UPF0178 family.
       0.629
BF49_1540
FIG00985526 hypothetical protein.
   
    0.562
BF49_6978
*Name Phosphatidylserinephosphatidylglycerophosphatecardiolipi n synthases and related enzymes.
   
    0.562
BF49_2764
Threonine synthase EC 4231.
 
  
  0.537
BF49_1282
Transcriptional regulator GntR family domain Aspartate aminotransferase EC 2611.
  
 
  0.525
BF49_0651
Dihydroorotase.
 
     0.517
BF49_0906
Predicted transcriptional regulator of pyridoxine metabolism.
  
 
  0.498
BF49_1111
Cysteine desulfurase EC 2817.
  
  
  0.485
BF49_3531
Dihydroorotase.
 
     0.481
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.