STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1091FIG00439747 hypothetical protein. (394 aa)    
Predicted Functional Partners:
BF49_1092
Oxidoreductase short chain dehydrogenasereductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.663
BF49_5319
Hypothetical protein.
  
    0.563
BF49_6316
Deoxyribodipyrimidine photolyase EC 41993; Belongs to the DNA photolyase family.
  
    0.560
BF49_0022
FRUCTOKINASE EC 2714.
  
    0.457
BF49_7347
FRUCTOKINASE EC 2714.
  
    0.457
BF49_1996
Xylose ABC transporter permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
   
    0.445
BF49_1093
Nodulation protein N.
       0.424
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.