STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_10953hydroxyisobutyrate dehydrogenase EC 11131; Belongs to the HIBADH-related family. (295 aa)    
Predicted Functional Partners:
BF49_1096
3hydroxyisobutyrylCoA hydrolase EC 3124.
 
 0.997
BF49_1098
Methylmalonatesemialdehyde dehydrogenase EC 12127.
 
 
 0.996
BF49_2373
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
  
 
 0.949
BF49_3997
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase isoleucine degradation EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
  
 
 0.949
BF49_1272
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
  
 
 0.938
BF49_1867
Aldehyde dehydrogenase EC 1213.
  
 
 0.938
BF49_3132
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
  
 
 0.938
BF49_2707
Omegaamino acidpyruvate aminotransferase EC 26118; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.937
BF49_0739
InterPro IPR002204 COGs COG2084.
  
  
 
0.931
BF49_5539
3hydroxyisobutyrate dehydrogenase EC 11131.
  
  
 
0.930
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.