STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1109Transcriptional regulator IclR family. (255 aa)    
Predicted Functional Partners:
BF49_6927
Allophanate hydrolase 2 subunit 1 EC 35154.
  
    0.680
BF49_4850
Transcriptional regulator IclR family.
  
     0.678
BF49_6341
Transcriptional regulator IclR family.
  
     0.630
BF49_1120
Transcriptional regulator IclR family.
  
     0.622
BF49_6926
Allophanate hydrolase 2 subunit 2 EC 35154.
  
    0.619
BF49_6082
Mhp operon transcriptional activator.
  
     0.588
BF49_4170
Transcriptional regulator IclR family.
  
     0.527
BF49_1110
Hypothetical protein.
       0.484
BF49_1770
FIG00444536 hypothetical protein; Belongs to the D-glutamate cyclase family.
  
    0.441
hmgA
Homogentisate 12dioxygenase EC 113115; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
 
 0.429
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.