Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1111Cysteine desulfurase EC 2817. (386 aa)    
Predicted Functional Partners:
BF49_6118
Putative ironsulfur cluster assembly scaffold protein for SUF system SufE2.
  
 0.982
BF49_1280
Similar to flavohemoprotein.
  
 0.910
BF49_2628
SirAlike; Belongs to the sulfur carrier protein TusA family.
   
 0.879
BF49_3812
Hypothetical protein.
   
 0.879
BF49_2412
Flavodoxin reductases ferredoxinNADPH reductases family 1 Vanillate Odemethylase oxidoreductase EC 11413.
  
 0.859
BF49_0715
Iron binding protein SufA for ironsulfur cluster assembly; Belongs to the HesB/IscA family.
  
 
 0.829
BF49_6781
Probable iron binding protein from the HesB IscA SufA family.
  
 
 0.829
BF49_6783
Probable iron binding protein from the HesB IscA SufA family; Belongs to the HesB/IscA family.
  
 
 0.829
BF49_2788
Adenylate cyclase EC 4611.
  
 0.828
BF49_5756
Ferredoxin 2Fe2S.
  
 0.824
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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