STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1117Circadian clock protein KaiC. (504 aa)    
Predicted Functional Partners:
BF49_1116
Sensory box sensor histidine kinaseresponse regulator EC 273.
 
     0.852
BF49_0756
Twocomponent sensor histidine kinase.
   
 
 0.838
BF49_0082
FIG056333 sensor.
   
 
 0.667
BF49_3764
Sensor histidine kinase.
   
 
 0.635
BF49_4682
Osmosensitive K channel histidine kinase KdpD EC 273.
   
 
 0.635
BF49_4874
Osmosensitive K channel histidine kinase KdpD EC 273.
   
 
 0.635
BF49_5149
Sensor histidine kinase.
   
 
 0.635
BF49_7155
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
   
 
 0.635
BF49_2142
Twocomponent hybrid sensor and regulator.
 
   
 0.594
BF49_6376
Cyclasedehydrase.
  
     0.483
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.