STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1119PropionylCoA carboxylase beta chain EC 6413. (500 aa)    
Predicted Functional Partners:
BF49_6655
MethylmalonylCoA epimerase EC 51991 EthylmalonylCoA epimerase.
 
 
 0.958
mdh
Malate dehydrogenase EC 11137; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.957
BF49_3681
MethylcrotonylCoA carboxylase biotincontaining subunit EC 6414.
 
 0.914
BF49_7095
MethylcrotonylCoA carboxylase biotincontaining subunit EC 6414.
 
 0.914
BF49_6363
Biotin carboxylase EC 63414 Biotin carboxyl carrier protein.
 
 0.883
BF49_7199
MethylcrotonylCoA carboxylase biotincontaining subunit EC 6414.
 
 0.883
BF49_1637
MethylmalonylCoA mutase EC 54992.
 
 
 0.799
BF49_1120
Transcriptional regulator IclR family.
       0.796
BF49_1634
MethylmalonylCoA mutase EC 54992.
 
 
 0.759
BF49_2674
Conserved hypothetical protein.
  
 
 0.754
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.