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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAGlutaminase EC 3512; Belongs to the glutaminase family. (615 aa)    
Predicted Functional Partners:
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
    
 0.996
BF49_0889
Glutamine synthetase type II eukaryotic EC 6312.
 
 
 0.973
BF49_6608
Glutamine synthetase type I EC 6312.
  
 
 0.968
BF49_3172
Glutamate synthase NADPH small chain EC 14113.
  
 
 0.955
BF49_2793
Proline dehydrogenase EC 15998 Proline oxidase Delta1pyrroline5carboxylate dehydrogenase EC 15112; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.931
murI
Glutamate racemase EC 5113; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.927
glmS
Glucosaminefructose6phosphate aminotransferase isomerizing EC 26116; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.920
murD
UDPNacetylmuramoylalanineDglutamate ligase EC 6329; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
    
 0.908
carB
Carbamoylphosphate synthase large chain EC 6355; Belongs to the CarB family.
    
 0.906
purF
Amidophosphoribosyltransferase EC 24214; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.905
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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