Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1126Hypothetical protein. (175 aa)    
Predicted Functional Partners:
BF49_3175
FIG00445285 hypothetical protein.
  
     0.733
BF49_1125
Blr3934 hypothetical protein.
       0.702
BF49_0545
FIG00442992 hypothetical protein.
  
     0.658
BF49_7168
Cationmultidrug efflux pump.
  
     0.615
BF49_2674
Conserved hypothetical protein.
  
     0.612
BF49_1186
Cyclohexanone monooxygenase EC 1141322.
 
  
  0.604
cysC
Sulfate adenylyltransferase subunit 1 EC 2774 Adenylylsulfate kinase EC 27125; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
   
    0.574
BF49_5201
Cyclohexanone monooxygenase EC 1141322.
 
  
  0.555
BF49_3257
FIG00440381 hypothetical protein.
  
 
  0.543
BF49_1871
23butanediol dehydrogenase Ralcohol forming R and Sacetoinspecific EC 1114.
 
     0.525
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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