STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1139Gluconate utilization system GntI transcriptional repressor. (366 aa)    
Predicted Functional Partners:
BF49_3951
Phosphocarrier protein nitrogen regulation associated.
 
 
 
 0.840
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
    
 
 0.823
tal
Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
   
 
 0.791
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 
 0.731
BF49_4890
Gluconokinase EC 27112.
 
 
 0.672
BF49_1459
Fructokinase EC 2714.
 
 
 0.643
pheT
PhenylalanyltRNA synthetase beta chain EC 61120; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.631
BF49_1140
Xylonate dehydratase EC 42182; Belongs to the IlvD/Edd family.
   
 
 0.626
BF49_3236
Thioredoxin reductase EC 1819.
   
 
 0.623
BF49_3402
Thioredoxin reductase EC 1819.
   
 
 0.623
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.