Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1143FIG00441059 hypothetical protein. (119 aa)    
Predicted Functional Partners:
BF49_6619
Gfalike protein.
  
     0.771
BF49_1054
Gfalike protein.
  
     0.770
BF49_5993
Gfalike protein.
  
     0.769
BF49_3129
Gfalike protein.
  
     0.707
BF49_4050
FIG00441233 hypothetical protein.
  
     0.662
BF49_1142
3oxoacylacylcarrier protein reductase EC 111100.
       0.650
BF49_1141
2keto3deoxyLfuconate dehydrogenase.
       0.603
BF49_1144
Peptidase M50.
       0.467
BF49_1002
Gfalike protein.
 
   
 0.413
BF49_1140
Xylonate dehydratase EC 42182; Belongs to the IlvD/Edd family.
       0.407
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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