STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1144Peptidase M50. (226 aa)    
Predicted Functional Partners:
BF49_1145
FIG00442844 hypothetical protein.
       0.632
ruvC
Crossover junction endodeoxyribonuclease RuvC EC 31224; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
 
     0.612
BF49_5564
FIG00440890 hypothetical protein.
  
  
 0.500
BF49_1143
FIG00441059 hypothetical protein.
       0.467
BF49_3600
Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.
 
     0.458
glgA
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
    0.446
glgA-2
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
    0.438
BF49_1792
Bll2902 protein.
  
    0.425
BF49_1579
Cation transport ATPase.
  
    0.423
BF49_4465
Mg2 transport ATPase Ptype EC 3632.
  
    0.423
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.