STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1147Biopolymer transport protein ExbDTolR. (151 aa)    
Predicted Functional Partners:
BF49_1148
MotATolQExbB proton channel family protein.
 
 0.998
tolQ
MotATolQExbB proton channel family protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 0.985
BF49_1146
Ferric siderophore transport system periplasmic binding protein TonB.
  
 0.983
BF49_5961
FIG00440141 hypothetical protein.
  
 0.925
BF49_4381
TolA protein.
  
 0.924
BF49_6400
TolA protein.
  
 0.924
BF49_1150
Ferrichromeiron receptor.
  
 
 0.892
BF49_0805
Hypothetical protein.
  
 0.882
BF49_0834
Prolinealaninerich repetetive membrane anchored protein.
  
 0.882
BF49_1149
Ironuptake factor PiuC.
  
    0.880
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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