STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1163Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family. (641 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase EC 2748; Essential for recycling GMP and indirectly, cGMP.
    
 0.533
BF49_1579
Cation transport ATPase.
  
 
 0.532
BF49_2504
Hypothetical protein.
  
 0.493
BF49_4465
Mg2 transport ATPase Ptype EC 3632.
  
 
 0.472
BF49_1162
Hypothetical protein.
       0.467
BF49_1166
Conserved domain protein.
    
 0.462
BF49_3572
FIG01200701 possible membrane protein.
  
 0.441
BF49_4411
FIG00853353 hypothetical protein.
  
 0.441
BF49_4812
Chemotaxis protein motC.
  
 0.441
BF49_6683
Glycosyl hydrolase BNR repeat.
  
 0.441
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.