STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1179Transcriptional regulator AraC family. (323 aa)    
Predicted Functional Partners:
BF49_5314
Transcriptional regulator AraC family.
  
     0.667
BF49_1356
Transcriptional regulator AraC family.
  
     0.621
BF49_1180
Transcriptional regulatory protein.
 
    0.545
BF49_1178
Hypothetical protein.
       0.528
BF49_1177
Transcriptional regulatory protein.
 
    0.496
BF49_0356
Transcriptional regulator AraC family.
 
 
 0.484
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
    
  0.450
BF49_1176
Transcriptional regulatory protein.
 
    0.421
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.