Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1186Cyclohexanone monooxygenase EC 1141322. (617 aa)    
Predicted Functional Partners:
BF49_2671
Hypothetical protein.
 
  
  0.699
BF49_1756
COGs COG0183.
  
    0.680
BF49_1185
Membranebound lytic murein transglycosylase B precursor EC 321.
       0.653
BF49_1126
Hypothetical protein.
 
  
  0.604
BF49_2043
Monooxygenase FADbinding.
  
 0.601
BF49_0862
Esteraselipase.
 
 0.600
BF49_0549
Alphabeta hydrolase fold3 domain protein.
 
 0.591
BF49_4573
Esterase.
 
 
 0.576
BF49_1975
Carboxymuconolactone decarboxylase.
 
  
  0.562
BF49_2315
Hypothetical protein.
 
 
 0.540
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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