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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1186Cyclohexanone monooxygenase EC 1141322. (617 aa)    
Predicted Functional Partners:
BF49_2671
Hypothetical protein.
 
  
  0.697
BF49_1756
COGs COG0183.
  
    0.680
BF49_1185
Membranebound lytic murein transglycosylase B precursor EC 321.
       0.654
BF49_2043
Monooxygenase FADbinding.
  
 0.629
BF49_0862
Esteraselipase.
 
 0.621
BF49_0549
Alphabeta hydrolase fold3 domain protein.
 
 0.613
BF49_1126
Hypothetical protein.
 
  
  0.602
BF49_4573
Esterase.
 
 
 0.600
BF49_5969
Bll5679 protein.
    
 
 0.597
BF49_4102
HMPPP hydrolase pyridoxal phosphatase Cof detected in genetic screen for thiamin metabolic genes PMID15292217.
 
 0.586
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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