Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_1187MediumchainfattyacidCoA ligase EC 621. (541 aa)    
Predicted Functional Partners:
BF49_6971
Hypothetical protein.
  
 0.937
BF49_2069
AcylCoA dehydrogenase EC 1387.
 
 
  0.928
BF49_3995
AcylCoA dehydrogenase EC 1387.
 
 
  0.928
BF49_6996
AcetoacetylCoA synthetase leucine EC 62116.
  
  
 
0.922
BF49_2108
3methylmercaptopropionylCoA ligase DmdB.
  
  
 
0.905
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.878
BF49_1188
IsovalerylCoA dehydrogenase EC 1384.
 
 
  0.767
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 0.748
BF49_4867
LongchainfattyacidCoA ligase EC 6213.
  
     0.674
BF49_3997
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase isoleucine degradation EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
 
 0.585
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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