Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1190Bsr3854 hypothetical protein. (65 aa)    
Predicted Functional Partners:
BF49_1191
Fusaric acid resistance protein FusB Fusaric acid resistance protein FusC.
 
   
 0.945
BF49_1189
Efflux transporter RND family MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.868
BF49_1192
Glutamate Aspartate periplasmic binding protein precursor GltI TC 3A134.
 
     0.500
BF49_6086
Nitratenitrite transporter.
  
   
 0.454
BF49_4984
Mlr2033 protein.
  
     0.438
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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