STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1202Transcriptional regulatory protein. (236 aa)    
Predicted Functional Partners:
BF49_1201
2pyrone46dicarboxylic acid hydrolase.
 
     0.734
BF49_1200
4oxalmesaconate hydratase EC 42183.
 
     0.581
BF49_1199
4carboxy4hydroxy2oxoadipate aldolase EC 41317.
 
     0.570
BF49_1197
3hydroxyisobutyrate dehydrogenase and related betahydroxyacid dehydrogenases.
 
     0.566
BF49_1203
Tricarboxylate transport protein TctC.
       0.550
BF49_1196
3hydroxyisobutyrate dehydrogenase and related betahydroxyacid dehydrogenases.
       0.508
BF49_1198
45dihydroxyphthalate decarboxylase EC 41155.
       0.502
BF49_1608
Hydrogen peroxideinducible genes activator.
  
 
   0.415
BF49_0498
Transcriptional regulator MarR family.
  
     0.411
BF49_0994
FIG00440764 hypothetical protein.
  
 
 
 0.411
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.