STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1216Transcriptional regulator MarR family. (161 aa)    
Predicted Functional Partners:
BF49_1219
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
     0.891
BF49_1218
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
     0.837
BF49_1217
Branchedchain amino acid transport ATPbinding protein LivF TC 3A141.
 
     0.833
BF49_1223
6hydroxynicotinate reductase EC 1371.
 
     0.829
BF49_1222
FIG00845751 hypothetical protein.
 
     0.821
BF49_1221
FIG00440100 hypothetical protein.
 
     0.794
BF49_1220
Branchedchain amino acidbinding protein.
 
     0.779
BF49_1607
FIG030567 hypothetical protein.
 
     0.667
BF49_1213
Adenine deaminase EC 3542.
  
   
 0.549
BF49_1215
Hypothetical protein.
       0.545
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.