STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
BF49_1219Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family. (629 aa)    
Predicted Functional Partners:
BF49_1218
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 
 0.991
BF49_1217
Branchedchain amino acid transport ATPbinding protein LivF TC 3A141.
 
 
 0.987
BF49_1220
Branchedchain amino acidbinding protein.
 
 
 0.978
BF49_2026
ABC transporter ATPbinding protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.921
BF49_4158
ABCtype branchedchain amino acid transport systems ATPase component; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.921
BF49_5696
Benzoate transport ATPase component.
 
 
 0.910
BF49_1216
Transcriptional regulator MarR family.
 
     0.891
BF49_4777
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 
 0.887
BF49_4064
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 
 0.886
BF49_5687
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 
 0.886
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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