Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1227Catechol 23dioxygenase EC 113112. (320 aa)    
Predicted Functional Partners:
BF49_1200
4oxalmesaconate hydratase EC 42183.
 
  
 0.755
BF49_1724
5carboxymethyl2hydroxymuconate semialdehyde dehydrogenase EC 12160; Belongs to the aldehyde dehydrogenase family.
 
 0.597
BF49_1199
4carboxy4hydroxy2oxoadipate aldolase EC 41317.
 
   
 0.594
BF49_1634
MethylmalonylCoA mutase EC 54992.
    
 0.594
BF49_1637
MethylmalonylCoA mutase EC 54992.
    
 0.594
BF49_2828
4hydroxyphenylacetate 3monooxygenase reductase component EC 168.
 
 
 0.591
BF49_3412
2oxohepta3ene17dioic acid hydratase EC 42.
 
   
 0.567
BF49_1722
2oxohepta3ene17dioic acid hydratase EC 42.
 
   
 0.566
BF49_0830
Salicylate hydroxylase EC 114131.
 
  
 0.561
BF49_3084
InterPro IPR006992 COGs COG2159.
  
   
 0.549
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.