STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1232Bipolar DNA helicase HerA. (573 aa)    
Predicted Functional Partners:
BF49_1233
Alkylhydroperoxidase precursor; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.525
BF49_2676
FIG00445811 hypothetical protein.
  
     0.493
BF49_6068
FIG00442381 hypothetical protein.
  
     0.450
BF49_0973
cAMPbinding proteins catabolite gene activator and regulatory subunit of cAMPdependent protein kinases.
 
     0.417
BF49_5847
FIG00440181 hypothetical protein.
  
     0.413
BF49_1231
Hypothetical protein.
       0.411
BF49_1815
FIG00443026 hypothetical protein.
  
     0.405
BF49_6497
Bsl5083 protein.
 
     0.405
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.