Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_1250Flagellar motor rotation protein MotA. (257 aa)    
Predicted Functional Partners:
BF49_1249
Flagellar motor rotation protein MotB.
 
 0.999
BF49_4811
Flagellar motor rotation protein MotB.
  
 0.994
BF49_4287
Flagellar motor rotation protein MotB.
 
 0.978
BF49_4504
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.962
fliP-2
Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.958
BF49_4505
Flagellar Mring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.953
fliP
Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.948
BF49_5780
Flagellar hook protein FlgE.
 
  
 0.947
BF49_5781
Flagellar hookassociated protein FlgK; Belongs to the flagella basal body rod proteins family.
 
  
 0.945
BF49_5827
Flagellar basalbody rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.945
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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