Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1252FIG00439437 hypothetical protein. (239 aa)    
Predicted Functional Partners:
BF49_6304
Glyoxalasebleomycin resistance proteindioxygenase.
 
   
 0.577
BF49_0917
NADdependent malic enzyme EC 11138.
    
 0.563
BF49_4098
Bll7611 hypothetical protein.
 
  
 0.503
BF49_1253
CDPdiacylglycerolserine Ophosphatidyltransferase EC 2788; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.489
BF49_3138
Bll7611 hypothetical protein.
 
  
 0.474
BF49_6364
Bll5266 protein; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily.
 
  
 0.463
BF49_4097
Bll7611 hypothetical protein.
 
  
 0.460
BF49_3137
Bll7611 hypothetical protein.
 
  
 0.453
BF49_1200
4oxalmesaconate hydratase EC 42183.
    
 0.447
BF49_6064
FIG00439945 hypothetical protein.
  
     0.430
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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