Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1258Rcitramalate synthase EC 231182; Belongs to the alpha-IPM synthase/homocitrate synthase family. (311 aa)    
Predicted Functional Partners:
BF49_1259
Rcitramalate synthase EC 231182; Belongs to the alpha-IPM synthase/homocitrate synthase family.
     0.994
leuC
3isopropylmalate dehydratase large subunit EC 42133; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
 
 0.991
leuD
3isopropylmalate dehydratase small subunit EC 42133; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
 
 
 0.990
BF49_0550
Branchedchain amino acid aminotransferase EC 26142.
  
 0.975
BF49_2993
Branchedchain amino acid aminotransferase EC 26142.
  
 0.975
ilvD-3
Dihydroxyacid dehydratase EC 4219; Belongs to the IlvD/Edd family.
 
 
 0.962
ilvD
Dihydroxyacid dehydratase EC 4219; Belongs to the IlvD/Edd family.
 
 
 0.960
ilvD-2
Dihydroxyacid dehydratase EC 4219; Belongs to the IlvD/Edd family.
 
 
 0.959
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
  
 
 0.957
BF49_5173
Acetolactate synthase small subunit EC 2216.
 
 
 0.948
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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