Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1259Rcitramalate synthase EC 231182; Belongs to the alpha-IPM synthase/homocitrate synthase family. (232 aa)    
Predicted Functional Partners:
BF49_1258
Rcitramalate synthase EC 231182; Belongs to the alpha-IPM synthase/homocitrate synthase family.
     0.994
leuC
3isopropylmalate dehydratase large subunit EC 42133; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
 
 0.926
leuD
3isopropylmalate dehydratase small subunit EC 42133; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
 
 
 0.918
BF49_1260
GCN5related Nacetyltransferase.
       0.804
leuB
3isopropylmalate dehydrogenase EC 11185; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 0.797
BF49_0550
Branchedchain amino acid aminotransferase EC 26142.
  
 
 0.762
BF49_2993
Branchedchain amino acid aminotransferase EC 26142.
  
 
 0.762
BF49_5173
Acetolactate synthase small subunit EC 2216.
 
  
 0.733
BF49_0721
Cysteine desulfurase EC 2817.
 
  
 0.721
BF49_1775
Tartrate dehydrogenase EC 11193 Tartrate decarboxylase EC 41173 Dmalic enzyme EC 11183.
  
 0.704
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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