Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cysSCysteinyltRNA synthetase EC 61116; Belongs to the class-I aminoacyl-tRNA synthetase family. (460 aa)    
Predicted Functional Partners:
BF49_6065
Serine acetyltransferase EC 23130.
 
 
 0.935
BF49_2494
Serine acetyltransferase EC 23130.
  
 
 0.868
BF49_4376
Serine acetyltransferase EC 23130.
  
 
 0.868
BF49_5672
Serine acetyltransferase EC 23130.
  
 
 0.868
BF49_7059
Cysteine synthase B EC 25147.
  
 
 0.865
hisS
HistidyltRNA synthetase EC 61121.
  
 
 0.849
thrS
ThreonyltRNA synthetase EC 6113; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
  
 0.836
leuS
LeucyltRNA synthetase EC 6114; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.824
valS
ValyltRNA synthetase EC 6119; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
 
  
 0.784
serS
SeryltRNA synthetase EC 61111; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
 
 
 0.778
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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