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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1264FIG00442049 hypothetical protein. (395 aa)    
Predicted Functional Partners:
BF49_0733
Large exoproteins involved in heme utilization or adhesion.
  
     0.768
BF49_1587
Mll7655 protein.
  
     0.768
BF49_2748
Chromosome segregation ATPases.
  
     0.768
BF49_0618
FIG00450081 hypothetical protein.
  
     0.766
BF49_6696
Possible outer membrane protein.
  
     0.761
BF49_5754
Kinesinlike protein.
  
     0.760
BF49_1618
FIG00442417 hypothetical protein.
  
     0.759
BF49_5453
Blr4701 putative outermembrane immunogenic protein precursor.
  
     0.758
BF49_5449
Blr4701 putative outermembrane immunogenic protein precursor.
  
     0.756
BF49_6099
FIG00440034 hypothetical protein.
  
     0.756
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.