Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1293TRAP dicarboxylate transporter DctQ subunit unknown substrate 6. (193 aa)    
Predicted Functional Partners:
BF49_1294
TRAP dicarboxylate transporter DctM subunit unknown substrate 6.
 
 
 0.995
BF49_0849
TRAP transporter solute receptor unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
 0.895
BF49_1295
TRAP transporter solute receptor unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
 0.895
BF49_1301
TRAP transporter solute receptor unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
 0.895
BF49_3247
TRAP transporter solute receptor unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
 0.895
moaA
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.546
BF49_5116
TRAPtype transport system small permease component predicted Nacetylneuraminate transporter.
  
 
  0.532
BF49_6997
Predicted gluconate TRAP family transporter DctM subunit.
  
 
  0.532
BF49_4354
TRAP dicarboxylate transporter DctM subunit unknown substrate 5.
 
  
  0.520
BF49_6994
TRAP dicarboxylate transporter DctM subunit unknown substrate 5.
 
  
  0.508
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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