STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1311Lfucobetapyranose dehydrogenase EC 111122. (341 aa)    
Predicted Functional Partners:
BF49_3903
Lfuconolactone hydrolase.
 
 0.975
BF49_3902
Lfucobetapyranose dehydrogenase EC 111122.
  
  
 
0.907
BF49_1459
Fructokinase EC 2714.
    
 0.807
BF49_2120
Oxidoreductase aldoketo reductase family.
 
 0.640
BF49_6399
Methylglyoxal reductase acetol producing EC 111 25diketoDgluconic acid reductase B EC 111274.
 
 0.640
BF49_1873
InterPro IPR001395 COGs COG0656.
 
 0.639
BF49_1312
Gluconolactonase EC 31117.
 
    0.615
BF49_1605
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.605
BF49_1371
FIG00439895 hypothetical protein.
 
  
 0.556
aqpZ
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.525
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.