Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1312Gluconolactonase EC 31117. (299 aa)    
Predicted Functional Partners:
BF49_5264
Glucose dehydrogenase PQQdependent EC 1152.
  
  
 0.943
BF49_2067
Broadspecificity glycerol dehydrogenase EC 119922 subunit SldA.
  
  
 0.942
BF49_4890
Gluconokinase EC 27112.
    
 0.939
BF49_1866
Gluconolactonase EC 31117.
  
     0.770
BF49_3830
Glucose 1dehydrogenase EC 11147.
  
 
  0.678
BF49_4348
Glucose 1dehydrogenase EC 11147.
  
 
  0.678
BF49_4849
3oxoacylacylcarrier protein reductase EC 111100.
  
 
  0.678
BF49_1311
Lfucobetapyranose dehydrogenase EC 111122.
 
  
 0.624
BF49_1486
Predicted 2keto3deoxyxylonate dehydratase.
 
   
 0.530
BF49_1591
Glucosemethanolcholine GMC oxidoreductaseNAD binding site.
  
 
 0.462
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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