Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1323Ribosexylosearabinosegalactoside ABCtype transport systems permease component 1. (323 aa)    
Predicted Functional Partners:
BF49_1321
Ribose ABC transport system ATPbinding protein RbsA TC 3A121.
 
 0.951
BF49_1320
Ribosexylosearabinosegalactoside ABCtype transport systems periplasmic sugar binding protein.
 
 0.916
BF49_2018
Dxylose transport ATPbinding protein XylG.
 
 0.912
BF49_1395
Ribose ABC transport system ATPbinding protein RbsA TC 3A121.
 
 0.911
BF49_1997
Dxylose transport ATPbinding protein XylG.
 
 0.911
BF49_1484
Putative sugar ABC transport system ATPbinding protein YtfR EC 36317.
 
 0.910
BF49_6676
Predicted Lrhamnose ABC transporter ATPbinding component.
 
 0.904
BF49_1316
Ribose ABC transport system ATPbinding protein RbsA TC 3A121.
 
 0.903
BF49_1476
Larabinose transport ATPbinding protein AraG TC 3A122.
 
 0.903
BF49_1398
ABC transporter sugarbinding protein.
 
 0.902
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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