STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1327Ribokinase EC 27115. (171 aa)    
Predicted Functional Partners:
BF49_1328
Ribokinase EC 27115.
     0.988
BF49_2162
Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 0.926
BF49_4302
Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 0.926
BF49_1576
Ribosephosphate pyrophosphokinase EC 2761; Belongs to the ribose-phosphate pyrophosphokinase family.
   
 0.922
prs
Ribosephosphate pyrophosphokinase EC 2761; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.922
rpiA
Ribose 5phosphate isomerase A EC 5316; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.919
rbsK
Ribokinase EC 27115; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
  
 
0.916
BF49_3501
Phosphoglucosamine mutase EC 54210 Phosphomannomutase EC 5428.
  
 
 0.915
BF49_2415
Phosphoglucomutase EC 5422.
   
 0.914
BF49_6203
Transketolase Nterminal section EC 2211.
    
 0.908
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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