Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1333Inosose dehydratase EC 42144. (299 aa)    
Predicted Functional Partners:
BF49_1334
Epiinositol hydrolase EC 371; Belongs to the TPP enzyme family.
 
 
 0.999
BF49_1336
Myoinositol 2dehydrogenase 1 EC 11118.
 
 
 0.996
BF49_6193
Myoinositol 2dehydrogenase 1 EC 11118.
 
 
 0.797
BF49_6014
Predicted transcriptional regulator of the myoinositol catabolic operon.
 
     0.790
BF49_1377
Dehydrogenase.
 
 
 0.719
BF49_5215
Oxidoreductase domain protein.
 
 
 0.654
BF49_5729
Myoinositol 2dehydrogenase EC 11118.
 
 
 0.649
BF49_1324
Rhamnulokinase RhaK in alphaproteobacteria EC 2715.
 
 
 0.620
xylB
Xylulose kinase EC 27117.
 
 
 0.612
BF49_1842
GLUCOSEFRUCTOSE OXIDOREDUCTASE EC 119928.
  
 
 0.580
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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