STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1338Maleate cistrans isomerase. (246 aa)    
Predicted Functional Partners:
BF49_1337
Dhydantoinase EC 3522.
 
     0.926
BF49_0338
Succinate dehydrogenase flavoprotein subunit EC 13991; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
  0.902
BF49_0337
Succinate dehydrogenase ironsulfur protein EC 13991; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
     
  0.900
BF49_0339
Succinate dehydrogenase hydrophobic membrane anchor protein.
     
  0.900
BF49_0340
Succinate dehydrogenase cytochrome b556 subunit.
     
  0.900
BF49_5283
Succinate dehydrogenase ironsulfur protein EC 13991.
     
  0.900
BF49_3335
Aspartate ammonialyase EC 4311.
     
 0.837
BF49_5647
Asparagine synthetase glutaminehydrolyzing EC 6354.
     
 0.807
argG
Argininosuccinate synthase EC 6345; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
     
  0.800
BF49_2247
Laspartate oxidase EC 14316; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
  0.800
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.