Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1357Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141; Belongs to the binding-protein-dependent transport system permease family. (336 aa)    
Predicted Functional Partners:
BF49_1358
Benzoate transport innermembrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
BF49_1359
Urea ABC transporter ATPase protein UrtD.
 
 
 0.984
BF49_1360
Putative hydroxybenzoate transporter.
 
 
 0.945
BF49_5695
InterPro IPR001851 COGs COG0559; Belongs to the binding-protein-dependent transport system permease family.
 
 0.937
BF49_6017
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.926
BF49_1355
Benzoate transport extracellular ligandbinding receptor.
 
 
  0.923
BF49_1157
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.916
BF49_2026
ABC transporter ATPbinding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.915
BF49_4063
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.915
BF49_5221
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.914
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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