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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1359Urea ABC transporter ATPase protein UrtD. (260 aa)    
Predicted Functional Partners:
BF49_1357
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
BF49_1358
Benzoate transport innermembrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
BF49_1360
Putative hydroxybenzoate transporter.
 
 
0.903
BF49_1355
Benzoate transport extracellular ligandbinding receptor.
 
 
  0.901
BF49_4776
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141 Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.893
BF49_1219
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.881
BF49_1364
FIG00440581 hypothetical protein.
 
     0.867
BF49_1363
FIG00441021 hypothetical protein.
 
     0.858
BF49_1361
TIMbarrel signal transduction protein.
 
     0.842
BF49_1365
Putative subunit of hydroxybenzoyl reductase.
 
   
 0.826
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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