Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_1362Signal recognition particle receptor protein FtsY alpha subunit TC 3A511. (966 aa)    
Predicted Functional Partners:
BF49_1364
FIG00440581 hypothetical protein.
 
     0.908
BF49_1363
FIG00441021 hypothetical protein.
 
     0.904
BF49_1372
FIG00444702 hypothetical protein.
 
     0.896
BF49_1360
Putative hydroxybenzoate transporter.
 
     0.848
BF49_3177
Putative activity regulator of membrane protease YbbK.
  
  
 0.846
BF49_1365
Putative subunit of hydroxybenzoyl reductase.
 
     0.845
BF49_1368
4hydroxybenzoylCoA reductase alpha subunit EC 139920.
 
     0.843
BF49_1358
Benzoate transport innermembrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family.
 
     0.838
BF49_1367
4hydroxybenzoylCoA reductase alpha subunit EC 139920.
 
     0.836
BF49_1359
Urea ABC transporter ATPase protein UrtD.
 
     0.827
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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